This blog is the ONS (Open Notebook Science) record for the work that I personally perform in the lab. It is posted informally and without peer review. Please feel free to comment and contact me at bridget.eklund@ndsu.edu if there is something you're interested in. You can learn more about the lab on our wiki page (http://openwetware.org/wiki/Fisher). Thanks for visiting.

Friday, June 27, 2014

Biofilm Formation of S.maltophilia with Vancomycin

Today I am repeating the crystal violet assay with several modifications to the staining procedure. In attempt to reduce the variability between trials, I will be using a different method to wash the plates after 24 hours of incubation. I will only be using three of our isolates of S.maltophilia (BAA2423, BAA84, and 13270) with vanc25 and vanc100, with no vanc as a control.  I have updated the protocol below to accommodate for the new wash method.

Materials
  • Trypticase soy broth
  • Cultures of bacteria on plates
  • 15ml conical tubes
  • Pipet aid with 5ml sterile glass pipet
  • Shaker, 37°C
  • 96 well plate, sterile
  • Vacomycin stock
  • Sterile distilled water
  • 0.1% crystal violet
  • p200 pipet and tips
  • 95% ethanol
  • 96 well plate reader
Procedure
  1. Create an overnight culture of selected bacteria strains by adding 3ml TBS into each 15ml conical tube, add a loop of bacteria, and vortex well until bacteria is thoroughly suspended.
  2. Place tubes in 37°C shaking incubator overnight.
  3. Add 3mls of 2xTSB into new 15ml conical tubes labeled appropriately. From overnight cultures, pipet 30µl from culture into new media to create a 1:100 dilution.
  4. Create a microtiter plate with different concentrations of vancomycin so that each strain will have a total of 18 wells (3 concentrations with 6 replicated wells).
    • Create a 50μg/mL and 200μg/mL working stock
    • Add 100μL to the wells that half of that vanc concentration
    • Add 100μL of sterile water to all other wells
    • Concentrations of vancomycin should be 0, 50, and 200 μg/ml.
  5. Add 100µl of inoculated media into each designated well, final volume of all wells should be 200μL and final vanco concentrations will be 0, 25, and 100 μg/ml
  6. Incubate plates at 37°C for 24 hours.
  7. Carefully transfer culture from each inoculated well into a new 96-well plate and measure OD600 by using a plate reader set to 600nm.
  8. Gently submerge the original plate in a 2 inch deep pan containing 0.1% crystal violet.
  9. Let plate sit in the crystal violet for 15 minutes at room temp.
  10. Remove the plate and gently submerge in a new pan containing distilled water.
  11. Repeat in clean water 3 times to remove excess crystal violet and any unattached cells.
  12. Let the plate dry for 15 minutes in the hood.
  13. Add 200µl 95% Ethanol to each well, let sit for at least 5 minutes; vortex gently if necessary.
  14. Read plate at 600 nm with plate reader.
//BEE 

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